saxomode

saxomode is an open-source toolkit for 3D ventricular shape analysis from cardiac magnetic resonance short axis view medical images.
It provides an end-to-end pipeline for generating, aligning, and analyzing ventricular point clouds, including principal component analysis (PCA) and mesh generation.

• Source code: ComputationalPhysiology/MAD-SSA.git

• Documentation: https://computationalphysiology.github.io/MAD-SSA/

Install

Install with pip

python3 -m pip install git+https://github.com/ComputationalPhysiology/MAD-SSA.git

Available Demos

• Generate Point Cloud

• Run Full Pipeline