Projects

Here we can write about different projects. Perhaps link to documentation

Pulse

Pulse is a python package based on FEniCS that can be used to solve continuum mechanincs problems using the finite element method.

CBCBeat

CBCBeat is a collection of Python-based solvers for cardiac electrophysiology models.

simcardems

simcardems is a FEniCS-based cardiac electro-mechanics solver and is developed as a part of the SimCardio Test project. The solver depends on pulse and cbcbeat.

LDRB

ldrb is a software for assigning myocardial fiber orientations based on the Laplace Dirichlet Ruled-Based algorithm.

Action potential features

ap_features is package for computing features of action potential traces

Gotran

gotran (General ODE TRAnslator) is a library for declaring ODEs and that provide automatic code generation

Goss

goss (General ODE System solver) is a C++ library (with python bindings) for solving ordinary differential equations.

cardiac-mps

cardiac-mps is a package for reading and analyzing MPS data.

mps-motion

mps-motion is a library for tracking motion in cardiac mps data.